Info • Aspergillus niger CBS 513.88


The genome sequence and gene prediction of Aspergillus niger CBS 513.88 were not determined by the JGI, but were downloaded from NCBI). Please note that this copy of the genome is not maintained by the author and is therefore not automatically updated. This copy of the genome does not include the mitochondrial chromosome or genes. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Summary statistics for the Aspergillus niger CBS 513.88 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 33.98
Sequencing read coverage depth 7.5x
# of contigs 471
# of scaffolds 19
# of scaffolds >= 2Kbp 19
Scaffold N50 6
Scaffold L50 (Mbp) 2.53
# of gaps 452
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 3.63, 3.63, 2.93

Gene Models ExternalModels
length (bp) of: average median
gene 1574 1334
transcript 1324 1089
exon 370 176
intron 99 70
protein length (aa) 441 363
exons per gene 3.57 3
# of gene models 14097

Genome Reference(s)


This project was not sequenced at the JGI.