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Info • Aspergillus nutans CBS 121.56 v1.0

Status

[November 2019] The Aspergillus nutans CBS 121.56 v1.0 genome was sequenced with Illumina, assembled with SPAdes, and annotated with the JGI Annotation Pipeline.

Summary statistics for the Aspergillus nutans CBS 121.56 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 34.35
Sequencing read coverage depth 48.24x
# of contigs 512
# of scaffolds 427
# of scaffolds >= 2Kbp 270
Scaffold N50 28
Scaffold L50 (Mbp) 0.39
# of gaps 85
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 1.09, 1.03, 1.00


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 43462 40214 92.5%
Ests est.fasta 128587527 117822241 91.6%


Gene Models FilteredModels1
length (bp) of: average median
gene 1962 1700
transcript 1769 1524
exon 539 327
intron 87 65
description:
protein length (aa) 487 406
exons per gene 3.28 3
# of gene models 11620


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.