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Info • Aspergillus ochraceus MUT 2036 v1.0

Status

[June 2021] The Aspergillus ochraceus MUT 2036 v1.0 genome was sequenced with PacBio, assembled with Flye, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 35.77
Sequencing read coverage depth 92.73x
# of contigs 8
# of scaffolds 8
# of scaffolds >= 2Kbp 8
Scaffold N50 3
Scaffold L50 (Mbp) 5.44
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 6.24, 6.24, 5.44


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 37595 36258 96.4%
Ests est.fasta 118086195 116658134 98.8%


Gene Models FilteredModels1
length (bp) of: average median
gene 1909 1662
transcript 1726 1498
exon 529 322
intron 83 64
description:
protein length (aa) 485 407
exons per gene 3.26 3
# of gene models 12115


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.