Info • Aspergillus persii CBS 112795 v1.0

Status

[September 2016] The Aspergillus persii CBS 112795 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus persii v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.82
Sequencing read coverage depth 84.6x
# of contigs 391
# of scaffolds 342
# of scaffolds >= 2Kbp 306
Scaffold N50 37
Scaffold L50 (Mbp) 0.31
# of gaps 49
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.85, 0.82, 0.76


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 35541 34400 96.8%
Ests est.fasta 93919722 92160573 98.1%


Gene Models FilteredModels1
length (bp) of: average median
gene 1828 1555
transcript 1654 1398
exon 531 324
intron 85 64
description:
protein length (aa) 457 375
exons per gene 3.11 3
# of gene models 12945


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.