Status
[March 2021] The Aspergillus phaeropenicillioides DTO 356-D6 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 23.48 |
| Sequencing read coverage depth | 135.8x |
| # of contigs | 571 |
| # of scaffolds | 507 |
| # of scaffolds >= 2Kbp | 390 |
| Scaffold N50 | 58 |
| Scaffold L50 (Mbp) | 0.12 |
| # of gaps | 64 |
| % of scaffold length in gaps | 0.2% |
| Three largest Scaffolds (Mbp) | 0.51, 0.48, 0.43 |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 1739 | 1445 |
| transcript | 1538 | 1281 |
| exon | 455 | 242 |
| intron | 87 | 62 |
| description: | ||
| protein length (aa) | 513 | 427 |
| exons per gene | 3.38 | 3 |
| # of gene models | 8609 |
Collaborators
Links
Funding
The work conducted by the U.S. Department of Energy Joint Genome
Institute, a DOE Office of Science User Facility, is supported by
the Office of Science of the U.S. Department of Energy under
Contract No. DE-AC02-05CH11231.
