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Info • Aspergillus pulvericola CBS 137327 v1.0

Status

[November 2019] The Aspergillus pulvericola CBS 137327 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus pulvericola CBS 137327 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 34.90
Sequencing read coverage depth 69.9x
# of contigs 450
# of scaffolds 435
# of scaffolds >= 2Kbp 401
Scaffold N50 43
Scaffold L50 (Mbp) 0.24
# of gaps 15
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.26, 0.74, 0.64


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 49981 48743 97.5%
Ests est.fasta 110125483 109452750 99.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1966 1696
transcript 1773 1536
exon 536 319
intron 86 63
description:
protein length (aa) 487 405
exons per gene 3.31 3
# of gene models 11818


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.