Status
[April 2022] The Aspergillus punctus DTO308-D1 v1.0 genome was sequenced with Illumina, assembled with SPAdes, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 26.67 |
| Sequencing read coverage depth | 127.66x |
| # of contigs | 333 |
| # of scaffolds | 281 |
| # of scaffolds >= 2Kbp | 267 |
| Scaffold N50 | 44 |
| Scaffold L50 (Mbp) | 0.20 |
| # of gaps | 52 |
| % of scaffold length in gaps | 0.2% |
| Three largest Scaffolds (Mbp) | 0.56, 0.49, 0.49 |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 1638 | 1368 |
| transcript | 1462 | 1215 |
| exon | 455 | 238 |
| intron | 81 | 59 |
| description: | ||
| protein length (aa) | 487 | 405 |
| exons per gene | 3.22 | 3 |
| # of gene models | 9582 |
Collaborators
Links
Funding
The work conducted by the U.S. Department of Energy Joint Genome
Institute, a DOE Office of Science User Facility, is supported by
the Office of Science of the U.S. Department of Energy under
Contract No. DE-AC02-05CH11231.
