Status
[October 2022] The Aspergillus purpureus CBS 754.74 v1.0 genome was sequenced with Illumina, assembled with SPAdes, and annotated with the JGI Annotation Pipeline.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 35.11 |
| Sequencing read coverage depth | 86.3x |
| # of contigs | 801 |
| # of scaffolds | 770 |
| # of scaffolds >= 2Kbp | 711 |
| Scaffold N50 | 106 |
| Scaffold L50 (Mbp) | 0.10 |
| # of gaps | 31 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 0.32, 0.30, 0.30 |
| ESTs | Data set | # sequences total | # mapped to genome | % mapped to genome |
| EstClusters | ESTclusters | 33277 | 26116 | 78.5% |
| Ests | est.fasta | 44549443 | 44088527 | 99.0% |
| Gene Models | FilteredModels1 | |
| length (bp) of: | average | median |
| gene | 1891 | 1635 |
| transcript | 1704 | 1461 |
| exon | 506 | 299 |
| intron | 81 | 59 |
| description: | ||
| protein length (aa) | 481 | 399 |
| exons per gene | 3.37 | 3 |
| # of gene models | 11214 |
Collaborators
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Funding
The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.
