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Info • Aspergillus puulaauensis IBT 32284 v1.0

Status

[November 2019] The Aspergillus puulaauensis IBT 32284 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus puulaauensis IBT 32284 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 33.96
Sequencing read coverage depth 61.3x
# of contigs 203
# of scaffolds 198
# of scaffolds >= 2Kbp 181
Scaffold N50 24
Scaffold L50 (Mbp) 0.45
# of gaps 5
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.50, 1.21, 1.04


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 26718 25079 93.9%
Ests est.fasta 33433006 32230296 96.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1902 1660
transcript 1733 1512
exon 529 318
intron 76 59
description:
protein length (aa) 494 423
exons per gene 3.27 3
# of gene models 12901


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.