Info • Aspergillus quadrilineatus (floriformis) CBS 937.73 v1.0

Status

[July 2017] The Aspergillus quadrilineatus CBS 937.73 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus quadrilineatus (floriformis) CBS 937.73 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 32.52
Sequencing read coverage depth 87.4x
# of contigs 507
# of scaffolds 467
# of scaffolds >= 2Kbp 416
Scaffold N50 53
Scaffold L50 (Mbp) 0.18
# of gaps 40
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.68, 0.60, 0.60


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 23778 23231 97.7%
Ests est.fasta 20815334 17394869 83.6%


Gene Models FilteredModels1
length (bp) of: average median
gene 1882 1638
transcript 1704 1470
exon 521 308
intron 80 60
description:
protein length (aa) 486 408
exons per gene 3.27 3
# of gene models 11243


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.