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Info • Aspergillus rambellii SRRC1468

Status

The genome sequence and gene models of Aspergillus rambellii SRRC1468 have not been determined by the JGI, but were downloaded from NCBI on Sep 16, 2016. In order to allow comparative analyses with other fungal genomes sequenced by the Joint Genome Institute, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

 

Summary statistics for the Aspergillus rambellii release are below.
Genome Assembly
Genome Assembly size (Mbp) 26.44
Sequencing read coverage depth
# of contigs 4177
# of scaffolds 4177
# of scaffolds >= 2Kbp 1116
Scaffold N50 212
Scaffold L50 (Mbp) 0.04
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.17, 0.15, 0.13


Gene Models ExternalModels
length (bp) of: average median
gene 1791 1490
transcript 1581 1314
exon 473 251
intron 91 66
description:
protein length (aa) 527 438
exons per gene 3.34 3
# of gene models 7761


Genome Reference(s)

Funding

This project was not sequenced at the JGI.