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Info • Aspergillus restrictus CBS 118.33 v1.0

Status

[July 2016] The Aspergillus restrictus CBS 118.33 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus restrictus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 23.26
Sequencing read coverage depth 102.5x
# of contigs 323
# of scaffolds 297
# of scaffolds >= 2Kbp 282
Scaffold N50 57
Scaffold L50 (Mbp) 0.14
# of gaps 26
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.45, 0.32, 0.32


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 21348 19567 91.7%
Ests est.fasta 48499627 48209200 99.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1894 1642
transcript 1723 1488
exon 565 332
intron 86 65
description:
protein length (aa) 478 402
exons per gene 3.05 3
# of gene models 9143


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.