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Info • Aspergillus sepultus CBS 257.85 v1.0

Status

[November 2019] The Aspergillus sepultus CBS 257.85 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus sepultus CBS 257.85 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 32.18
Sequencing read coverage depth 81.7x
# of contigs 218
# of scaffolds 194
# of scaffolds >= 2Kbp 170
Scaffold N50 17
Scaffold L50 (Mbp) 0.65
# of gaps 24
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.29, 1.28, 1.26


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 42414 38810 91.5%
Ests est.fasta 143094147 141919995 99.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1899 1641
transcript 1739 1505
exon 538 328
intron 74 58
description:
protein length (aa) 478 400
exons per gene 3.23 3
# of gene models 12290


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.