Info • Aspergillus sesamicola CBS 137324 v1.0

Status

[November 2019] The Aspergillus sesamicola CBS 137324 v1.0 genome was sequenced with Illumina, assembled with SPAdes, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus sesamicola CBS 137324 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 38.31
Sequencing read coverage depth 115.03x
# of contigs 476
# of scaffolds 435
# of scaffolds >= 2Kbp 406
Scaffold N50 67
Scaffold L50 (Mbp) 0.18
# of gaps 41
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.61, 0.53, 0.51


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 33620 31938 95.0%
Ests est.fasta 38517494 37224551 96.6%


Gene Models FilteredModels1
length (bp) of: average median
gene 1960 1710
transcript 1756 1521
exon 521 311
intron 88 64
description:
protein length (aa) 485 407
exons per gene 3.37 3
# of gene models 12058


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.