Info • Aspergillus spinosus CBS 483.65 v1.0

Status

[March 2017] The Aspergillus spinosus CBS 483.65 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus spinosus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 34.18
Sequencing read coverage depth 98.6x
# of contigs 614
# of scaffolds 538
# of scaffolds >= 2Kbp 477
Scaffold N50 50
Scaffold L50 (Mbp) 0.18
# of gaps 76
% of scaffold length in gaps 0.2%
Three largest Scaffolds (Mbp) 1.00, 0.95, 0.75


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 41750 39963 95.7%
Ests est.fasta 45828117 42370661 92.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1824 1591
transcript 1656 1440
exon 525 317
intron 80 61
description:
protein length (aa) 454 376
exons per gene 3.15 3
# of gene models 11801


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.