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Info • Aspergillus tennesseensis IBT 32283 v1.0

Status

[November 2019] The Aspergillus tennesseensis IBT 32283 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus tennesseensis v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 33.97
Sequencing read coverage depth 74.4x
# of contigs 209
# of scaffolds 194
# of scaffolds >= 2Kbp 160
Scaffold N50 22
Scaffold L50 (Mbp) 0.49
# of gaps 15
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.43, 1.24, 1.06


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 53761 52070 96.9%
Ests est.fasta 161724405 160976942 99.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1945 1707
transcript 1774 1558
exon 542 326
intron 77 59
description:
protein length (aa) 492 418
exons per gene 3.27 3
# of gene models 12788


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.