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Info • Aspergillus thesauricus IBT 34227 v1.0

Status

[November 2019] The Aspergillus thesauricus IBT 34227 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus thesauricus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.88
Sequencing read coverage depth 87.5x
# of contigs 666
# of scaffolds 610
# of scaffolds >= 2Kbp 554
Scaffold N50 55
Scaffold L50 (Mbp) 0.20
# of gaps 56
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.74, 0.73, 0.66


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 41057 39032 95.1%
Ests est.fasta 125319618 123602182 98.6%


Gene Models FilteredModels1
length (bp) of: average median
gene 1880 1635
transcript 1692 1459
exon 515 309
intron 84 61
description:
protein length (aa) 467 387
exons per gene 3.28 3
# of gene models 12812


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.