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Info • Aspergillus triticus CBS266.81 v1.0

Status

[July 2016] The Aspergillus triticus CBS 266.81 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus triticus v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 27.45
Sequencing read coverage depth 97.4x
# of contigs 247
# of scaffolds 228
# of scaffolds >= 2Kbp 141
Scaffold N50 24
Scaffold L50 (Mbp) 0.39
# of gaps 19
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.65, 1.12, 0.80


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 23209 22725 97.9%
Ests est.fasta 32215760 31876910 98.9%


Gene Models FilteredModels1
length (bp) of: average median
gene 1907 1653
transcript 1718 1489
exon 542 325
intron 89 65
description:
protein length (aa) 480 406
exons per gene 3.17 3
# of gene models 9769


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.