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Info • Aspergillus tsurutae IBT 34206 v1.0

Status

[November 2019] The Aspergillus tsurutae IBT 34206 v1.0 genome was sequenced with Illumina, assembled with AllPathsLG, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Aspergillus tsurutae IBT 34206 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 28.25
Sequencing read coverage depth 128.9x
# of contigs 325
# of scaffolds 299
# of scaffolds >= 2Kbp 266
Scaffold N50 31
Scaffold L50 (Mbp) 0.28
# of gaps 26
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 1.01, 0.89, 0.80


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 39979 38835 97.1%
Ests est.fasta 132773513 130426335 98.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 2005 1743
transcript 1825 1584
exon 552 332
intron 80 61
description:
protein length (aa) 492 411
exons per gene 3.31 3
# of gene models 9736


Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.