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Info • Aspergillus versicolor v1.0

Status

This draft genome was produced using Illumina data and assembled with AllPathsLG. The genome was annotated with the JGI annotation pipeline and custom analyses.

Summary statistics for the Aspergillus versicolor CBS 583.65 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 33.13
Sequencing read coverage depth 178.1
# of contigs 58
# of scaffolds 51
# of scaffolds >= 2Kbp 41
Scaffold N50 5
Scaffold L50 (Mbp) 2.49
# of gaps 7
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 5.02, 4.50, 3.67


ESTs Data set # sequences total # mapped to genome % mapped to genome
RNAseq contigs RNAseq contigs 33697 32755 97.2%


Gene Models FilteredModels1
length (bp) of: average median
gene 1762 1522
transcript 1600 1386
exon 505 297
intron 77 59
description:
protein length (aa) 481 410
exons per gene 3.17 3
# of gene models 13228


Collaborators

Ronald de Vries, CBS Fungal Biodiversity Centre, Institute of the Royal Netherlands Academy of Arts and Sciences

Genome Reference(s)

Links

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.