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The genome sequence and gene prediction of Botrytis cinerea B05.10 have not been determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on Nov 11, 2024. All published models are available as ExternalModels. In order to ensure this genome is comparable to those sequenced and annotated by the JGI, we applied standard filters to ExternalModels to produce the initial GeneCatalog. A total of 2316 ExternalModels were excluded based on one of the following classifications: 1) association with repetitive elements, 2) pseudogenes with internal stop codons, 3) alternative isoforms or overlapping transcript models, 4) alleles on secondary scaffolds, and 5) short models lacking functional annotation. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. The JGI Annotation Pipeline was used to add functional annotation to the genes.
Botrytis cinerea is a necrotrophic fungus that affects many plant species, although its most notable hosts may be wine grapes. The species name Botrytis cinerea is derived from the Latin for "grapes like ashes". In viticulture, it is commonly known as "botrytis bunch rot"; in horticulture, it is usually called "grey mould" or "gray mold". The fungus gives rise to two different kinds of infections on grapes. The first, grey rot, is the result of consistently wet or humid conditions, and typically results in the loss of the affected bunches. The second, noble rot, occurs when drier conditions follow wetter, and can result in distinctive sweet dessert wines, such as Sauternes, the Aszú of Tokaji, or Grasă de Cotnari.
Genome Reference(s)
Van Kan JA, Stassen JH, Mosbach A, Van Der Lee TA, Faino L, Farmer AD, Papasotiriou DG, Zhou S, Seidl MF, Cottam E, Edel D, Hahn M, Schwartz DC, Dietrich RA, Widdison S, Scalliet G
A gapless genome sequence of the fungus Botrytis cinerea.
Mol Plant Pathol. 2017 Jan;18(1):75-89. doi: 10.1111/mpp.12384
Staats M, van Kan JA
Genome update of Botrytis cinerea strains B05.10 and T4.
Eukaryot Cell. 2012 Nov;11(11):1413-4. doi: 10.1128/EC.00164-12