Info • Calosphaeria pulchella

Status

The genome of Calosphaeria pulchella was not sequenced by the JGI but by the Oregon State University within the AFTOL project. For more information, contact Prof. Dr. Joey Spatafora (spatafoj@science.oregonstate.edu). JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Calosphaeria pulchella genome v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 37.80
Sequencing read coverage depth 75x
# of contigs 5425
# of scaffolds 2010
# of scaffolds >= 2Kbp 1278
Scaffold N50 173
Scaffold L50 (Mbp) 0.06
# of gaps 3415
% of scaffold length in gaps 1.7%
Three largest Scaffolds (Mbp) 0.49, 0.25, 0.24


Gene Models ExternalModels
length (bp) of: average median
gene 1795 1504
transcript 1526 1284
exon 484 262
intron 127 78
description:
protein length (aa) 509 428
exons per gene 3.15 3
# of gene models 10200


Collaborators

PI: Joey Spatafora, Oregon State University

Funding

This project was not sequenced at the JGI.