Status
The genome of Chaetosphaeria innumera was not sequenced by the JGI but by the Oregon State University within the AFTOL project. For more information, contact Prof. Dr. Joey Spatafora ([email protected]). JGI tools were used to automatically annotate predicted proteins.
Summary statistics for the Chaetosphaeria innumera genome
v1.0 release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 37.69 |
| Sequencing read coverage depth | 60.93x |
| # of contigs | 2359 |
| # of scaffolds | 706 |
| # of scaffolds >= 2Kbp | 600 |
| Scaffold N50 | 92 |
| Scaffold L50 (Mbp) | 0.12 |
| # of gaps | 1653 |
| % of scaffold length in gaps | 0.5% |
| Three largest Scaffolds (Mbp) | 0.64, 0.53, 0.51 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 1784 | 1482 |
| transcript | 1557 | 1305 |
| exon | 505 | 269 |
| intron | 111 | 69 |
| description: | ||
| protein length (aa) | 519 | 435 |
| exons per gene | 3.08 | 3 |
| # of gene models | 11496 |
Collaborators
PI: Joey Spatafora, Oregon State University
Funding
This project was not sequenced at the
JGI.
