Info • Cochliobolus carbonum 26-R-13 v1.0


May 2012. The genome of Cochliobolus carbonum 26-R-13 was sequenced using Illumina technology and assembled using Velvet (version 1.1.04) and ALLPATHS (version r41043). There are no ESTs available for this organism.

Summary statistics for the Cochliobolus carbonum 26-R-13 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 31.27
Sequencing read coverage depth 200x
# of contigs 879
# of scaffolds 844
# of scaffolds >= 2Kbp 695
Scaffold N50 82
Scaffold L50 (Mbp) 0.11
# of gaps 35
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.50, 0.43, 0.40

Gene Models FilteredModels1
length (bp) of: average median
gene 1418 1188
transcript 1286 1059
exon 505 277
intron 87 58
protein length (aa) 429 353
exons per gene 2.55 2
# of gene models 12857


Genome Reference(s)


The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.