Info • Colletotrichum fioriniae PJ7


The genome sequence and gene prediction of Colletotrichum fioriniae PJ7 have not been determined by the JGI, but were provided by Michael Thon at the University of Salamanca, Spain. Please note that this copy of the genome is not maintained by the author and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.


Summary statistics for the Colletotrichum fioriniae PJ7 release are below.
Genome Assembly
Genome Assembly size (Mbp) 49.00
Sequencing read coverage depth 49.7x
# of contigs 1335
# of scaffolds 1096
# of scaffolds >= 2Kbp 646
Scaffold N50 102
Scaffold L50 (Mbp) 0.14
# of gaps 239
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.60, 0.56, 0.55

Gene Models ExternalModels
length (bp) of: average median
gene 1672 1434
transcript 1489 1263
exon 511 286
intron 98 65
protein length (aa) 496 421
exons per gene 2.91 2
# of gene models 13759

Genome Reference(s)


This project was not sequenced at the JGI.