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Info • Colletotrichum higginsianum IMI 349063

Status

The genome and gene models of Colletotrichum higginsianum were downloaded from NCBI on Feb 10, 2017. JGI tools were used to add functional annotations to the gene models. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated.

Summary statistics for the Colletotrichum higginsianum release are below.
Genome Assembly
Genome Assembly size (Mbp) 50.72
Sequencing read coverage depth 133.0x
# of contigs 25
# of scaffolds 25
# of scaffolds >= 2Kbp 25
Scaffold N50 5
Scaffold L50 (Mbp) 5.20
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 6.04, 6.01, 5.99


Gene Models ExternalModels
length (bp) of: average median
gene 1566 1318
transcript 1407 1167
exon 515 288
intron 94 69
description:
protein length (aa) 469 389
exons per gene 2.73 2
# of gene models 14651


Genome Reference(s)

Funding

This project was not sequenced at the JGI.