Info • Colletotrichum melonis CBS 134730

Status

The genome sequence and gene prediction of Colletotrichum melonis CBS 134730 have not been determined by the Joint Genome Institute (JGI), but were provided by Riccardo Baroncelli at the University of Salamanca. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.

Summary statistics for the Colletotrichum melonis release are below.
Genome Assembly
Genome Assembly size (Mbp) 50.14
Sequencing read coverage depth
# of contigs 110
# of scaffolds 92
# of scaffolds >= 2Kbp 92
Scaffold N50 7
Scaffold L50 (Mbp) 2.83
# of gaps 18
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 5.38, 4.66, 3.78


Gene Models ExternalModels
length (bp) of: average median
gene 1463 1227
transcript 1305 1080
exon 494 278
intron 98 64
description:
protein length (aa) 435 360
exons per gene 2.64 2
# of gene models 16823


Funding

This project was not sequenced at the JGI.