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Info • Colletotrichum salicis CBS607.94

Status

The genome sequence and gene prediction of Colletotrichum salicis CBS607.94 have not been determined by the JGI, but were provided by Michael Thon at the University of Salamanca, Spain. Please note that this copy of the genome is not maintained by the author and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

 

Summary statistics for the Colletotrichum salicis CBS607.94 release are below.
Genome Assembly
Genome Assembly size (Mbp) 48.37
Sequencing read coverage depth 40.4x
# of contigs 3141
# of scaffolds 2776
# of scaffolds >= 2Kbp 1842
Scaffold N50 309
Scaffold L50 (Mbp) 0.05
# of gaps 365
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.22, 0.21, 0.21


Gene Models ExternalModels
length (bp) of: average median
gene 1619 1371
transcript 1427 1194
exon 491 281
intron 103 65
description:
protein length (aa) 476 398
exons per gene 2.91 2
# of gene models 13783


Genome Reference(s)

Funding

This project was not sequenced at the JGI.