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Info • Colletotrichum sp. CBS 101611

Status

The genome sequence and gene prediction of Colletotrichum sp. CBS 101611 have not been determined by the Joint Genome Institute (JGI), but were provided by Riccardo Baroncelli at the University of Salamanca. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.

Summary statistics for the Colletotrichum sp. release are below.
Genome Assembly
Genome Assembly size (Mbp) 62.97
Sequencing read coverage depth
# of contigs 369
# of scaffolds 367
# of scaffolds >= 2Kbp 353
Scaffold N50 60
Scaffold L50 (Mbp) 0.33
# of gaps 2
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.55, 1.51, 0.83


Gene Models ExternalModels
length (bp) of: average median
gene 1438 1182
transcript 1246 1029
exon 479 265
intron 122 66
description:
protein length (aa) 415 343
exons per gene 2.60 2
# of gene models 17391


Funding

This project was not sequenced at the JGI.