Info • Colletotrichum sublineola TX430BB

Status

The genome sequence and gene models of Colletotrichum gleosporioides Cg-14 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 46.76
Sequencing read coverage depth
# of contigs 6215
# of scaffolds 1625
# of scaffolds >= 2Kbp 1472
Scaffold N50 183
Scaffold L50 (Mbp) 0.07
# of gaps 4590
% of scaffold length in gaps 1.8%
Three largest Scaffolds (Mbp) 0.42, 0.38, 0.36


Gene Models ExternalModels
length (bp) of: average median
gene 1659 1378
transcript 1476 1218
exon 527 297
intron 104 65
description:
protein length (aa) 492 406
exons per gene 2.80 2
# of gene models 12699


Genome Reference(s)

Funding

This project was not sequenced at the JGI.