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Info • Colletotrichum tamarilloi CBS 129955

Status

The genome sequence and gene prediction of Colletotrichum tamarilloi CBS 129955 have not been determined by the Joint Genome Institute (JGI), but were provided by Riccardo Baroncelli at the University of Salamanca. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.

Summary statistics for the Colletotrichum tamarilloi release are below.
Genome Assembly
Genome Assembly size (Mbp) 52.08
Sequencing read coverage depth
# of contigs 606
# of scaffolds 604
# of scaffolds >= 2Kbp 442
Scaffold N50 30
Scaffold L50 (Mbp) 0.41
# of gaps 2
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.98, 1.64, 1.40


Gene Models ExternalModels
length (bp) of: average median
gene 1425 1187
transcript 1261 1041
exon 482 270
intron 104 66
description:
protein length (aa) 420 347
exons per gene 2.61 2
# of gene models 17399


Funding

This project was not sequenced at the JGI.