Info • Conidiobolus coronatus NRRL28638 v1.0

Status

Version 1.0. February 2012. This draft assembly of Conidiobolus coronatus was sequenced using 454 technology.

Summary statistics for the Conidiobolus coronatus NRRL28638 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp} 39.90
Sequencing read coverage depth 16.31x
# of contigs 7809
# of scaffolds 1050
# of scaffolds >= 2Kbp 1050
Scaffold N50 113
Scaffold L50 (Mbp) 0.10
# of gaps 6759
% of scaffold length in gaps 20.5%
Three largest Scaffolds (Mbp) 0.55, 0.50, 0.46


ESTs Data set # sequences total # mapped to genome % mapped to genome
Ests Illumina RNAseq ESTs assembled with RNNotator 20582 15219 73.9%


Gene Models FilteredModels1
length (bp) of: average median
gene 1266 1049
transcript 1114 928
exon 401 185
intron 88 54
description:
protein length (aa) 348 287
exons per gene 2.78 2
# of gene models 10635


Collaborators

  • Joey Spatafora, Oregon State University
  • Igor Grigoriev, DOE Joint Genome Institute

Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.