Info • Cryptococcus amylolentus CBS 6039

Status

The genome sequence and gene models of Cryptococcus amylolentus CBS 6039 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Genome Assembly
Genome Assembly size (Mbp) 20.25
Sequencing read coverage depth
# of contigs 18
# of scaffolds 15
# of scaffolds >= 2Kbp 15
Scaffold N50 6
Scaffold L50 (Mbp) 1.55
# of gaps 3
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 2.23, 2.22, 1.71


Gene Models ExternalModels
length (bp) of: average median
gene 1935 1653
transcript 1671 1393
exon 298 183
intron 59 52
description:
protein length (aa) 491 401
exons per gene 5.61 5
# of gene models 10306


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Sun S, Yadav V, Billmyre RB, Cuomo CA, Nowrousian M, Wang L, Souciet JL, Boekhout T, Porcel B, Wincker P, Granek JA, Sanyal K, Heitman J
Fungal genome and mating system transitions facilitated by chromosomal translocations involving intercentromeric recombination.
PLoS Biol. 2017 Aug;15(8):e2002527. doi: 10.1371/journal.pbio.2002527

Funding

This project was not sequenced at the JGI.