Our BLAST function is limited due to shortage of computational resource, we apologize for the inconvenience.
Info • Cystostereum murrayi CysMur001 v1.0

Status

[October 2016] The Cystostereum murrayi CysMur001 genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Summary statistics for the Cystostereum murraii v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 32.38
Sequencing read coverage depth 118.1x
# of contigs 24
# of scaffolds 24
# of scaffolds >= 2Kbp 24
Scaffold N50 7
Scaffold L50 (Mbp) 1.95
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 4.08, 3.03, 2.21


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 69545 68339 98.3%
Ests est.fasta 195140520 192295821 98.5%


Gene Models FilteredModels1
length (bp) of: average median
gene 1748 1497
transcript 1443 1230
exon 253 155
intron 67 56
description:
protein length (aa) 417 343
exons per gene 5.71 5
# of gene models 13196


Collaborators

Sundy Maurice, University of Oslo

Otto Miettinen, University of Helsinki

Inger Skrede, University of Oslo

Håvard Kauserud, University of Oslo

Joseph W. Spatafora, Oregon State University

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.