Info • Edhazardia aedis USNM 41457

Status

The genome sequence and gene models of Edhazardia aedis USNM 41457 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.


Genome Assembly
Genome Assembly size (Mbp) 51.35
Sequencing read coverage depth
# of contigs 2088
# of scaffolds 1429
# of scaffolds >= 2Kbp 594
Scaffold N50 35
Scaffold L50 (Mbp) 0.43
# of gaps 659
% of scaffold length in gaps 1.2%
Three largest Scaffolds (Mbp) 1.67, 1.42, 1.24


Gene Models ExternalModels
length (bp) of: average median
gene 1195 864
transcript 1195 864
exon 1189 864
intron 80 54
description:
protein length (aa) 354 237
exons per gene 1.01 1
# of gene models 4190


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Desjardins CA, Sanscrainte ND, Goldberg JM, Heiman D, Young S, Zeng Q, Madhani HD, Becnel JJ, Cuomo CA
Contrasting host-pathogen interactions and genome evolution in two generalist and specialist microsporidian pathogens of mosquitoes.
Nat Commun. 2015 May 13;6():7121. doi: 10.1038/ncomms8121

Links

Funding

This project was not sequenced at the JGI.