Info • Encephalitozoon romaleae SJ-2008


This genome was sequenced by Jean-François Pombert, Mohammed Selmanb, Fabien Burki et al. in Department of Botany, Canadian Institute for Advanced Research, University of British Columbia, Vancouver, BC, V6T 1Z4 Canada (Gain and loss of multiple functionally related, horizontally transferred genes in the reduced genomes of two microsporidian parasites). Please check their data use policies.

Summary statistics for the Encephalitozoon romaleae SJ-2008 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 2.19
Sequencing read coverage depth 300x
# of contigs 13
# of scaffolds 13
# of scaffolds >= 2Kbp 13
Scaffold N50 6
Scaffold L50 (Mbp) 0.19
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.23, 0.23, 0.21

Gene Models ExternalModels
length (bp) of: average median
gene 1065 843
transcript 1065 843
exon 1046 831
intron 31 28
protein length (aa) 355 281
exons per gene 1.02 1
# of gene models 1831

Genome Reference(s)


This project was not sequenced at the JGI.