Info • Fusarium mori NRRL 22230 v1.0

Status

[January 2022] The Fusarium mori NRRL 22230 v1.0 genome was sequenced with PacBio, assembled with Flye, and annotated with the JGI Annotation Pipeline. Mitochondrial genome was assembled separately and is available in the downloads section.

Genome Assembly
Genome Assembly size (Mbp) 43.64
Sequencing read coverage depth 82.18x
# of contigs 31
# of scaffolds 31
# of scaffolds >= 2Kbp 31
Scaffold N50 7
Scaffold L50 (Mbp) 2.12
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 4.99, 4.53, 3.25


ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 42127 40754 96.7%
Ests est.fasta 56350619 56029105 99.4%


Gene Models FilteredModels1
length (bp) of: average median
gene 1805 1583
transcript 1656 1439
exon 561 346
intron 78 56
description:
protein length (aa) 470 397
exons per gene 2.95 2
# of gene models 14523


Collaborators

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.