Info • Fusarium oxysporum NRRL 32931


The genome sequence and gene predictions of Fusarium oxysporum NRRL 32931 have not been determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on Oct 1, 2019. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Fusarium oxysporum NRRL 32931 release are below.
Genome Assembly
Genome Assembly size (Mbp) 47.91
Sequencing read coverage depth 195x
# of contigs 488
# of scaffolds 168
# of scaffolds >= 2Kbp 94
Scaffold N50 5
Scaffold L50 (Mbp) 4.46
# of gaps 320
% of scaffold length in gaps 1.5%
Three largest Scaffolds (Mbp) 5.47, 5.30, 4.64

Gene Models ExternalModels
length (bp) of: average median
gene 2419 2039
transcript 2263 1885
exon 742 441
intron 78 56
protein length (aa) 467 396
exons per gene 3.05 3
# of gene models 23735


Li-Jun Ma, University of Massachusetts Amherst, USA

Genome Reference(s)


This project was not sequenced at the JGI.