Info • Fusarium oxysporum f. sp. melonis (FoMelon) NRRL 26406


The genome sequence and gene predictions of Fusarium oxysporum f. sp. melonis (FoMelon) NRRL 26406 have not been determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on Oct 1, 2019. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Fusarium oxysporum f. sp. melonis (FoMelon) NRRL 26406 release are below.
Genome Assembly
Genome Assembly size (Mbp) 54.03
Sequencing read coverage depth 157x
# of contigs 1825
# of scaffolds 1146
# of scaffolds >= 2Kbp 767
Scaffold N50 7
Scaffold L50 (Mbp) 2.21
# of gaps 679
% of scaffold length in gaps 0.5%
Three largest Scaffolds (Mbp) 6.35, 5.24, 4.29

Gene Models ExternalModels
length (bp) of: average median
gene 2325 1950
transcript 2167 1797
exon 722 426
intron 81 56
protein length (aa) 448 378
exons per gene 3.00 3
# of gene models 26719


Li-Jun Ma, University of Massachusetts Amherst, USA

Genome Reference(s)


This project was not sequenced at the JGI.