Info • Hanseniaspora uvarum AWRI3580

Status

The genome sequence and gene models of Hanseniaspora uvarum AWRI3580 were not determined by the Joint Genome Institute (JGI), but were downloaded from Ensembl Fungi on April 11, 2020. Please note that this copy of the genome is not maintained by Ensembl and is therefore not automatically updated. The JGI Annotation Pipeline was used to add additional functional annotation to the author's chromosomes and proteins.

Summary statistics for the Hanseniaspora uvarum AWRI3580 are below.
Genome Assembly
Genome Assembly size (Mbp) 8.81
Sequencing read coverage depth 60x
# of contigs 44
# of scaffolds 18
# of scaffolds >= 2Kbp 18
Scaffold N50 3
Scaffold L50 (Mbp) 1.29
# of gaps 26
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.92, 1.51, 1.29


Gene Models ExternalModels
length (bp) of: average median
gene 1587 1332
transcript 1574 1323
exon 1517 1278
intron 363 307
description:
protein length (aa) 525 441
exons per gene 1.04 1
# of gene models 4061


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Sternes PR, Lee D, Kutyna DR, Borneman AR
Genome Sequences of Three Species of Hanseniaspora Isolated from Spontaneous Wine Fermentations.
Genome Announc. 2016 Nov 17;4(6):. doi: 10.1128/genomeA.01287-16

Funding

This project was not sequenced at the JGI.