Info • Haplosporangium sp. NRRL 3175


This genome was sequenced at low coverage by the Joint Genome Institute (JGI), then assembled and annotated by Jason Stajich. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm.
Genome Assembly
Genome Assembly size (Mbp) 36.13
Sequencing read coverage depth
# of contigs 4400
# of scaffolds 3995
# of scaffolds >= 2Kbp 2639
Scaffold N50 515
Scaffold L50 (Mbp) 0.02
# of gaps 405
% of scaffold length in gaps 0.1%
Three largest Scaffolds (Mbp) 0.09, 0.09, 0.08

Gene Models ExternalModels
length (bp) of: average median
gene 1996 1623
transcript 1607 1290
exon 414 211
intron 137 100
protein length (aa) 536 430
exons per gene 3.88 3
# of gene models 10850


Genome Reference(s)



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.