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Info • Hypomyces perniciosus HP10


The genome sequence and gene prediction of Hypomyces perniciosus HP10 have not been determined by the Joint Genome Institute (JGI), but were downloaded from NCBI on July 13, 2021. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by NCBI and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Genome Assembly
Genome Assembly size (Mbp) 44.01
Sequencing read coverage depth 190x
# of contigs 23
# of scaffolds 23
# of scaffolds >= 2Kbp 23
Scaffold N50 4
Scaffold L50 (Mbp) 5.10
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 6.94, 5.36, 5.32

Gene Models ExternalModels
length (bp) of: average median
gene 1914 1533
transcript 1772 1405
exon 645 369
intron 80 64
protein length (aa) 479 386
exons per gene 2.75 2
# of gene models 11447

Genome Reference(s)


This project was not sequenced at the JGI.