Info • Ilyonectria sp. v1.0

Status

The genome of Ilyonectria sp. was sequenced using Illumina technology and assembled with AllPathsLG release version R41043.

Summary statistics for the Ilyonectria sp. v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 63.66
Sequencing read coverage depth 153.5x
# of contigs 950
# of scaffolds 325
# of scaffolds >= 2Kbp 280
Scaffold N50 9
Scaffold L50 (Mbp) 2.89
# of gaps 625
% of scaffold length in gaps 0.8%
Three largest Scaffolds (Mbp) 6.02, 4.60, 4.12


ESTs Data set # sequences total # mapped to genome % mapped to genome
Ests RNNotator-assembled Illumina ESTs 46390 42538 91.7%


Gene Models FilteredModels2
length (bp) of: average median
gene 1609 1377
transcript 1448 1235
exon 515 323
intron 91 60
description:
protein length (aa) 428 354
exons per gene 2.81 2
# of gene models 22250


Collaborators

Genome Reference(s)

Funding

The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.