Status
The genome sequence and gene prediction of Kazachstania africana CBS 2517 have not been determined by the JGI, but were downloaded from Genbank on Dec 12, 2014. Please note that this copy of the genome is not maintained by the authors and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.
Summary statistics for the Kazachstania africana CBS 2517
v1.0 release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 11.13 |
| Sequencing read coverage depth | 1x |
| # of contigs | 25 |
| # of scaffolds | 12 |
| # of scaffolds >= 2Kbp | 12 |
| Scaffold N50 | 4 |
| Scaffold L50 (Mbp) | 1.03 |
| # of gaps | 13 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 1.76, 1.49, 1.34 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 1467 | 1203 |
| transcript | 1461 | 1200 |
| exon | 1408 | 1155 |
| intron | 173 | 95 |
| description: | ||
| protein length (aa) | 487 | 400 |
| exons per gene | 1.04 | 1 |
| # of gene models | 5378 |
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Gordon JL, Armisén D, Proux-Wéra E, ÓhÉigeartaigh SS, Byrne KP, Wolfe KH
Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents.
Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20024-9. doi: 10.1073/pnas.1112808108
Gordon JL, Armisén D, Proux-Wéra E, ÓhÉigeartaigh SS, Byrne KP, Wolfe KH
Evolutionary erosion of yeast sex chromosomes by mating-type switching accidents.
Proc Natl Acad Sci U S A. 2011 Dec 13;108(50):20024-9. doi: 10.1073/pnas.1112808108
Funding
This project was not sequenced at the JGI.
