Status
[Feb 2013]
The genome sequence and gene prediction of Kluyveromyces
lactis were not determined by the JGI, but was downloaded from
Génolevures
[Release Version: 2012/02/09]. Please note that this copy of the
genome is not maintained by Génolevures and is therefore not
automatically updated. The JGI Annotation Pipeline was used to add
additional functional annotation to the known and predicted
proteins.
Summary statistics for the Kluyveromyces lactis CLIB210
v1.0 release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 10.69 |
| Sequencing read coverage depth | ? |
| # of contigs | 6 |
| # of scaffolds | 6 |
| # of scaffolds >= 2Kbp | 6 |
| Scaffold N50 | 3 |
| Scaffold L50 (Mbp) | 1.75 |
| # of gaps | 0 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 2.60, 2.23, 1.75 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 1467 | 1227 |
| transcript | 1457 | 1221 |
| exon | 1408 | 1182 |
| intron | 295 | 170 |
| description: | ||
| protein length (aa) | 486 | 407 |
| exons per gene | 1.03 | 1 |
| # of gene models | 5076 |
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I, De Montigny J, Marck C, Neuvéglise C, Talla E, Goffard N, Frangeul L, Aigle M, Anthouard V, Babour A, Barbe V, Barnay S, Blanchin S, Beckerich JM, Beyne E, Bleykasten C, Boisramé A, Boyer J, Cattolico L, Confanioleri F, De Daruvar A, Despons L, Fabre E, Fairhead C, Ferry-Dumazet H, Groppi A, Hantraye F, Hennequin C, Jauniaux N, Joyet P, Kachouri R, Kerrest A, Koszul R, Lemaire M, Lesur I, Ma L, Muller H, Nicaud JM, Nikolski M, Oztas S, Ozier-Kalogeropoulos O, Pellenz S, Potier S, Richard GF, Straub ML, Suleau A, Swennen D, Tekaia F, Wésolowski-Louvel M, Westhof E, Wirth B, Zeniou-Meyer M, Zivanovic I, Bolotin-Fukuhara M, Thierry A, Bouchier C, Caudron B, Scarpelli C, Gaillardin C, Weissenbach J, Wincker P, Souciet JL
Genome evolution in yeasts.
Nature. 2004 Jul 1;430(6995):35-44. doi: 10.1038/nature02579
Dujon B, Sherman D, Fischer G, Durrens P, Casaregola S, Lafontaine I, De Montigny J, Marck C, Neuvéglise C, Talla E, Goffard N, Frangeul L, Aigle M, Anthouard V, Babour A, Barbe V, Barnay S, Blanchin S, Beckerich JM, Beyne E, Bleykasten C, Boisramé A, Boyer J, Cattolico L, Confanioleri F, De Daruvar A, Despons L, Fabre E, Fairhead C, Ferry-Dumazet H, Groppi A, Hantraye F, Hennequin C, Jauniaux N, Joyet P, Kachouri R, Kerrest A, Koszul R, Lemaire M, Lesur I, Ma L, Muller H, Nicaud JM, Nikolski M, Oztas S, Ozier-Kalogeropoulos O, Pellenz S, Potier S, Richard GF, Straub ML, Suleau A, Swennen D, Tekaia F, Wésolowski-Louvel M, Westhof E, Wirth B, Zeniou-Meyer M, Zivanovic I, Bolotin-Fukuhara M, Thierry A, Bouchier C, Caudron B, Scarpelli C, Gaillardin C, Weissenbach J, Wincker P, Souciet JL
Genome evolution in yeasts.
Nature. 2004 Jul 1;430(6995):35-44. doi: 10.1038/nature02579
Funding
This project was not sequenced at the JGI.
