Info • Lanmaoa asiatica v1.0

Status

[February 2023] The genome sequence and gene models of Lanmaoa asiatica were not determined by the Joint Genome Institute (JGI). The assembly and annotation were performed by GrandOmics Biosciences (Wuhan, China). In order to allow comparative analyses with other genomes sequenced by the JGI, a copy of this genome is incorporated into the JGI Genome Portal. JGI tools were used to automatically annotate functions and families of the predicted proteins. Please note that the release presented here includes the gene annotation v1.0, and all gene models are included in the ExternalModels track. This annotation has not been published and permission should be requested for use.

Summary statistics for the Lanmaoa asiatica v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 46.64
Sequencing read coverage depth
# of contigs 112
# of scaffolds 112
# of scaffolds >= 2Kbp 107
Scaffold N50 8
Scaffold L50 (Mbp) 2.45
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 4.03, 4.03, 3.03


Gene Models ExternalModels
length (bp) of: average median
gene 1313 825
transcript 1057 681
exon 251 165
intron 82 56
description:
protein length (aa) 352 227
exons per gene 4.22 3
# of gene models 14118


Collaborators

Genome Reference(s)

Funding

This project was not sequenced at the JGI.