Info • Leratiomyces ceres mycota028 v1.0
Please note that this organism is for archival use only. Please see the current Leratiomyces ceres mycota028 v2.0 site for the latest data and information.


[June 2020] The genome was sequenced with PacBio, assembled with Falcon, and annotated with the JGI Annotation Pipeline. The transcriptome was sequenced with Illumina and assembled with Trinity. The mitochondrial genome was assembled separately and is available on the Download page.

Summary statistics for the Leratiomyces ceres mycota028 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 61.90
Sequencing read coverage depth 32.49x
# of contigs 785
# of scaffolds 785
# of scaffolds >= 2Kbp 778
Scaffold N50 122
Scaffold L50 (Mbp) 0.14
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 1.18, 0.91, 0.80

ESTs Data set # sequences total # mapped to genome % mapped to genome
EstClusters ESTclusters 63576 60147 94.6%
Ests est.fasta 271827118 268221323 98.7%

Gene Models FilteredModels1
length (bp) of: average median
gene 1812 1570
transcript 1447 1232
exon 236 143
intron 73 60
protein length (aa) 419 341
exons per gene 6.13 5
# of gene models 15547



The work conducted by the U.S. Department of Energy Joint Genome Institute, a DOE Office of Science User Facility, is supported by the Office of Science of the U.S. Department of Energy under Contract No. DE-AC02-05CH11231.