Status
Summary statistics for the Leucoagaricus gongylophorus
Ac12 v1.0 release are below.
| Genome Assembly | |
| Genome Assembly size (Mbp) | 101.58 |
| Sequencing read coverage depth | 15.0x |
| # of contigs | 92785 |
| # of scaffolds | 92785 |
| # of scaffolds >= 2Kbp | 12047 |
| Scaffold N50 | 13933 |
| Scaffold L50 (Mbp) | 0.00 |
| # of gaps | 0 |
| % of scaffold length in gaps | 0.0% |
| Three largest Scaffolds (Mbp) | 0.10, 0.06, 0.03 |
| Gene Models | ExternalModels | |
| length (bp) of: | average | median |
| gene | 1534 | 1211 |
| transcript | 1189 | 945 |
| exon | 213 | 132 |
| intron | 73 | 56 |
| description: | ||
| protein length (aa) | 396 | 315 |
| exons per gene | 5.59 | 4 |
| # of gene models | 5420 |
Genome Reference(s)
Please cite the following publication(s) if you use the data from this genome in your research:
Aylward FO, Burnum-Johnson KE, Tringe SG, Teiling C, Tremmel DM, Moeller JA, Scott JJ, Barry KW, Piehowski PD, Nicora CD, Malfatti SA, Monroe ME, Purvine SO, Goodwin LA, Smith RD, Weinstock GM, Gerardo NM, Suen G, Lipton MS, Currie CR
Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens.
Appl Environ Microbiol. 2013 Jun;79(12):3770-8. doi: 10.1128/AEM.03833-12
Aylward FO, Burnum-Johnson KE, Tringe SG, Teiling C, Tremmel DM, Moeller JA, Scott JJ, Barry KW, Piehowski PD, Nicora CD, Malfatti SA, Monroe ME, Purvine SO, Goodwin LA, Smith RD, Weinstock GM, Gerardo NM, Suen G, Lipton MS, Currie CR
Leucoagaricus gongylophorus produces diverse enzymes for the degradation of recalcitrant plant polymers in leaf-cutter ant fungus gardens.
Appl Environ Microbiol. 2013 Jun;79(12):3770-8. doi: 10.1128/AEM.03833-12
Funding
This project was not sequenced at the JGI.
