Info • Marssonina brunnea f. sp. monogermtubi NL1


The genome sequence and gene prediction of Marssonina brunnea f. sp. multigermtubi NL1 have not been determined by the Joint Genome Institute (JGI), but were provided by Qiang Cheng on August 20, 2020. In order to allow comparative analyses with other fungal genomes sequenced by the JGI, a copy of this genome is incorporated into Mycocosm. Please note that this copy of the genome is not maintained by Qiang Cheng and is therefore not automatically updated. JGI tools were used to automatically annotate predicted proteins.

Summary statistics for the Marssonina brunnea f. sp. monogermtubi NL1 release are below.
Genome Assembly
Genome Assembly size (Mbp) 50.29
Sequencing read coverage depth 1x
# of contigs 1105
# of scaffolds 1105
# of scaffolds >= 2Kbp 892
Scaffold N50 130
Scaffold L50 (Mbp) 0.11
# of gaps 0
% of scaffold length in gaps 0.0%
Three largest Scaffolds (Mbp) 0.50, 0.48, 0.46

Gene Models ExternalModels
length (bp) of: average median
gene 1623 1354
transcript 1438 1179
exon 451 237
intron 86 62
protein length (aa) 479 393
exons per gene 3.19 3
# of gene models 9852


  • Qiang Cheng, Nanjing Forestry University, China


This project was not sequenced at the JGI.