Info • Metarhizium acridum CQMa 102

Status

This genome was sequenced by Gao Q, Jin K, Ying S-H, Zhang Y, Xiao G et al in Key Laboratory of Insect Developmental and Evolutionary Biology, Institute of Plant Physiology and Ecology, Shanghai Institutes for Biological Sciences, Chinese Academy of Sciences, Shanghai, China (Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum).

Summary statistics for the Metarhizium acridum CQMa 102 v1.0 release are below.
Genome Assembly
Genome Assembly size (Mbp) 39.42
Sequencing read coverage depth 107x
# of contigs 1560
# of scaffolds 241
# of scaffolds >= 2Kbp 229
Scaffold N50 36
Scaffold L50 (Mbp) 0.33
# of gaps 1319
% of scaffold length in gaps 3.5%
Three largest Scaffolds (Mbp) 1.84, 1.16, 1.03


Gene Models ExternalModels
length (bp) of: average median
gene 1673 1407
transcript 1481 1221
exon 549 312
intron 115 72
description:
protein length (aa) 494 407
exons per gene 2.70 2
# of gene models 9849


Genome Reference(s)

Please cite the following publication(s) if you use the data from this genome in your research:

Gao Q, Jin K, Ying SH, Zhang Y, Xiao G, Shang Y, Duan Z, Hu X, Xie XQ, Zhou G, Peng G, Luo Z, Huang W, Wang B, Fang W, Wang S, Zhong Y, Ma LJ, St Leger RJ, Zhao GP, Pei Y, Feng MG, Xia Y, Wang C
Genome sequencing and comparative transcriptomics of the model entomopathogenic fungi Metarhizium anisopliae and M. acridum.
PLoS Genet. 2011 Jan 6;7(1):e1001264. doi: 10.1371/journal.pgen.1001264

Funding

This project was not sequenced at the JGI.